3D viewing requires an OpenGL 3D graphics driver.Search for characteristics in sequences and alignments.Local complexity region analyses and complexity plots.Sequence logo graphs along DNA, RNA, and protein alignments.Advanced re-alignment and fix-point alignment option.Batch processing of analyses on multiple sequences in one work-step.Interactive logos along both DNA, RNA and Protein alignments.DNA, RNA and protein sequence editor displaying both linear and circular molecules.Short form DNA statistics including a number of characteristics of a given molecule.Advanced restriction enzyme analysis and management.Reverse translation from protein to gene, based on translation tables from a number of species.Editor for graphically and algorithmically advanced primer design.Web-based lookup of sequence data in the UniProt and NCBI databases, as well as Google.Integrated UniProt searches (Swiss-Prot/TrEMBL).Comprehensive report including a range of protein analyses in one document.Report of protein statistics (one or more proteins in each report).Interactive translations of DNA and RNA to protein (both single sequences and alignments).Reverse translation from protein to gene (a number of translation tables).Web-based prediction of signal peptides and their cleavage sites (SignalP - the best tool available).Import of trace data files and quality scores from automated DNA sequening machines using Standard Chromatogram Format, ABI formats and PHD format (PHRED).Option of working in several active workspaces at a time, enabling simultaneous work on multiple projects.Import and export of data in a large number of file formats.All types of files can be saved in local projects, and launched from the program.Full integration of data input, data management, calculation results, and data export.CLC Main Workbench is an useful program that aggregates all features of CLC Free Workbench, CLC Protein Workbench, and CLC Gene Workbench in one integrated software package.ĬLC Main Workbench creates a software environment enabling users to make a large number of advanced protein sequence analyses, combined with smooth data management, and excellent graphical viewing and output options.
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